Protein ZmEREB106
ZmEREB106 is a protein in the AP2/ERF-ERF family.
Information
TF Name: ZmEREB106
Species: Maize
TF Family: AP2/ERF-ERF
Gene Name(Synonym): EREB106
Uniprot ID: A0A1D6PDQ1

Protein ZmEREB106

ZmEREB106 is a protein in the AP2/ERF-ERF family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d048991DAPseq no logo sequence fimo position
Zm00001d048991DAPseq no logo sequence fimo position
Zm00001d048991ChIPseq no logo sequence fimo position
Zm00001d048991PChIPseq no logo sequence fimo position

Interactions where ZmEREB106 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmEREB106 is the target  
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There are 176 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb168040_T001 from maize genome v5

Amino Acid Sequence
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MEMVLDNSAPGVVAAGQSYRGVRKRKWGKWVSEIREPGKKTRIWLGSFESPEMAAVAHDVAALRLRGREARLNFPGLVHR
FRRPATAEPDDVRAAALEAAAQVRFRPDLVAMQASGGEGGCCFGGAGGSDDTGSPEPLAAGEDDVAWDVLLGTDVEVVES
PKMWDELAEAMLVAPPAWEGDMEDTDDWAQGNLWDLPVWALGPTGRCSFTSFGF

MEMVLDNSAPGVVAAGQSYRGVRKRKWGKWVSEIREPGKKTRIWLGSFESPEMAAVAHDVAALRLRGREARLNFPGLVHR
FRRPATAEPDDVRAAALEAAAQVRFRPDLVAMQASGGEGGCCFGGAGGSDDTGSPEPLAAGEDDVAWDVLLGTDVEVVES
PKMWDELAEAMLVAPPAWEGDMEDTDDWAQGNLWDLPVWALGPTGRCSFTSFGF

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available

Nucleotide Sequence
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GTCCCCATGCATGCACCCATGCGCG...

Zm00001d048991_T001 from maize genome v4

Amino Acid Sequence
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MEMVLDNSAPGVVAAGQSYRGVRKRKWGKWVSEIREPGKKTRIWLGSFESPEMAAVAHDVAALRLRGREARLNFPGLVHR
FRRPATAEPDDVRAAALEAAAQVRFRPDLVAMQASGGEGGCCFGGAGGSDDTGSPEPLAAGEDDVAWDVLLGTDVEVVES
PKMWDELAEAMLVAPPAWEGDMEDTDDWAQGNLWDLPVWALGPTGRCSFTSFGF

Nucleotide Sequence
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ATGGAGATGGTGCTCGACAACAGCG...


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